Hello,
I can consider myself a bad luck brian now, because I’ve got third soft rejection because of WooCommerce outdated templates. Funny thing is that I update templates, submit theme … and BAM, immediately there’s an update for WooCommerce, lol. I think of dropping WooCommerce support for my theme (as it is not product oriented)
Use woocommerce hooks instead and then you wont need to edit the template files at all